STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBTubby protein homolog isoform X1. (506 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport protein 122 homolog isoform X1.
   
 0.708
TTC21B
Tetratricopeptide repeat protein 21B isoform X1.
    
 0.683
IFT140
LOW QUALITY PROTEIN: intraflagellar transport protein 140 homolog.
    
 0.681
WDR19
WD repeat-containing protein 19 isoform X1.
    
 0.670
TXNDC9
Thioredoxin domain containing 9.
    
 
 0.658
LYZ
Lysozyme C.
      
 0.651
MRPL30
39S ribosomal protein L30, mitochondrial.
      
 0.621
KCNE4
Potassium voltage-gated channel Isk-related subfamily E member 4.
      
 0.602
C8orf37
Protein C8orf37 homolog.
      
 0.581
BCAR3
Breast cancer anti-estrogen resistance protein 3 isoform X1.
    
 
 0.575
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.