Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPS1228S ribosomal protein S12, mitochondrial. (141 aa)    
Predicted Functional Partners:
MRPS7
28S ribosomal protein S7, mitochondrial.
 
 0.997
MRPS11
28S ribosomal protein S11, mitochondrial.
 
 0.997
MRPS16
28S ribosomal protein S16, mitochondrial isoform X1.
  
 0.996
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
  
 0.996
MRPS14
28S ribosomal protein S14, mitochondrial isoform X1.
  
 0.994
MRPS2
28S ribosomal protein S2, mitochondrial.
  
 0.994
MRPS10
28S ribosomal protein S10, mitochondrial.
  
 0.994
MRPS5
28S ribosomal protein S5, mitochondrial isoform X1.
  
 0.993
MRPS6
28S ribosomal protein S6, mitochondrial.
  
 0.993
RPS20
LOW QUALITY PROTEIN: 40S ribosomal protein S20.
  
 0.992
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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