STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3GALT6Galactosylxylosylprotein 3-beta-galactosyltransferase. (335 aa)    
Predicted Functional Partners:
B4GALT7
Beta-1,4-galactosyltransferase 7 isoform X1.
    
 0.969
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 isoform X1.
   
 
 0.954
UBE2J2
Ubiquitin-conjugating enzyme E2 J2.
 
      0.722
PGPEP1
Pyroglutamyl-peptidase 1 isoform X1.
      
 0.574
UXS1
UDP-glucuronate decarboxylase 1.
      
 0.564
DSE
Dermatan-sulfate epimerase isoform X1.
      
 0.561
XYLT1
Xylosyltransferase 1 isoform X1.
    
 
 0.509
XYLT2
Protein xylosyltransferase.
    
 
 0.509
SDC2
Syndecan-2 isoform X1.
     
 0.500
DCN
Decorin.
     
 0.475
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.