Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDF445 kDa calcium-binding protein. (355 aa)    
Predicted Functional Partners:
CALB1
Calbindin.
      
 0.735
PVALB
Parvalbumin alpha.
      
 0.719
CALB2
Calretinin.
      
 0.711
S100B
Protein S100-B.
      
 0.709
C6orf47
Uncharacterized protein C6orf47 homolog.
      
 0.639
B3GALT6
Galactosylxylosylprotein 3-beta-galactosyltransferase.
      
 0.514
S100G
Protein S100-G.
    
 
 0.491
RAP1A
Ras-related protein Rap-1A.
   
 
 0.491
GCA
Grancalcin.
      
 0.477
CALML4
Calmodulin-like protein 4 isoform X1.
      
 0.466
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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