STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH4MutS protein homolog 4 isoform X1. (956 aa)    
Predicted Functional Partners:
MSH5
MutS protein homolog 5 isoform X1.
  
0.998
PMS1
LOW QUALITY PROTEIN: PMS1 protein homolog 1.
 
 0.945
MLH1
DNA mismatch repair protein Mlh1 isoform X1.
 
 0.938
MLH3
LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3.
 
 0.938
PMS2
Mismatch repair endonuclease PMS2 isoform X1.
 
 0.934
ENSPCIP00000046034
annotation not available
   
 
 0.887
PCNA
Proliferating cell nuclear antigen.
   
 0.866
EXO1
Exonuclease 1.
   
 0.859
TOP3A
DNA topoisomerase 3-alpha.
  
 0.825
BLM
Bloom syndrome protein.
  
 0.815
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.