Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPP40Ribonuclease P protein subunit p40 isoform X1. (363 aa)    
Predicted Functional Partners:
RPP38
Ribonuclease P protein subunit p38 isoform X1.
    
 0.976
RPP25
Ribonucleases P/MRP protein subunit RPP25.
    
 0.973
RPP30
Ribonuclease P/MRP protein subunit RPP1.
    
 0.973
POP4
Ribonuclease P protein subunit p29 isoform X1.
   
 0.964
POP1
LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit POP1.
    
  0.902
RPP25L
Ribonuclease P protein subunit p25-like protein.
    
  0.902
POP7
Ribonuclease P/MRP protein subunit RPP20.
     
  0.900
ATP6V1D
V-type H+-transporting ATPase subunit D.
   
 0.781
NOB1
RNA-binding protein NOB1 isoform X1.
     
  0.768
ENSPCIP00000042317
annotation not available
   
 0.740
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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