STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRBReceptor-type tyrosine-protein phosphatase beta isoform X1. (2214 aa)    
Predicted Functional Partners:
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
    
 0.922
MET
Proto-oncogene tyrosine-protein kinase Met.
    
 0.745
MST1R
Macrophage stimulating 1 receptor.
    
 0.745
CDH5
Cadherin 5, type 2, VE-cadherin.
   
 0.699
PTN
Pleiotrophin isoform X1.
   
 0.652
ADGRF5
LOW QUALITY PROTEIN: adhesion G protein-coupled receptor F5.
   
 
 0.557
TEK
Endothelial-specific receptor tyrosine kinase.
   
 0.554
TIE1
Tyrosine-protein kinase receptor Tie-1.
   
 0.422
FLT3
Receptor-type tyrosine-protein kinase FLT3 isoform X1.
   
 0.417
TBC1D31
TBC1 domain family member 31 isoform X1.
      
 0.414
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.