STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4ACharged multivesicular body protein 4A. (263 aa)    
Predicted Functional Partners:
PDCD6IP
Programmed cell death 6-interacting protein.
    
 0.982
CHMP4B
Charged multivesicular body protein 4b.
  
 
0.950
CHMP4C
Charged multivesicular body protein 4c.
  
 
0.950
ENSPCIP00000009385
Charged multivesicular body protein 1b-2.
   
 0.947
CHMP1A
Charged multivesicular body protein 1a.
   
 0.947
CHMP7
Charged multivesicular body protein 7.
    
0.942
CHMP6
Charged multivesicular body protein 6.
   
 
0.937
TM9SF1
Transmembrane 9 superfamily member 1.
 
 
  0.844
CHMP3
Charged multivesicular body protein 3.
    
 0.790
CHMP2B
Charged multivesicular body protein 2B.
    
 0.778
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.