STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACTR5Actin-related protein 5 isoform X1. (604 aa)    
Predicted Functional Partners:
INO80C
INO80 complex subunit C isoform X1.
    
 0.997
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
   
 0.996
TFPT
TCF3 fusion partner isoform X1.
    
 0.994
ACTR8
Actin-related protein 8.
   
 0.994
INO80
DNA helicase INO80 isoform X1.
    
 0.993
INO80E
INO80 complex subunit E.
    
 0.991
INO80B
INO80 complex subunit B.
    
 0.989
MCRS1
Microspherule protein 1.
    
 0.987
INO80D
INO80 complex subunit D isoform X1.
    
 0.982
YY1
YY1 transcription factor.
    
 0.981
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.