Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IPO4Importin-4. (1048 aa)    
Predicted Functional Partners:
ASF1A
Histone chaperone ASF1A.
   
 
 0.959
IPO5
Importin-5 isoform X1.
   
 
 0.931
ASF1B
Histone chaperone ASF1B.
   
 
 0.908
KPNB1
Importin subunit beta-1.
   
 
 0.863
RRP12
Ribosomal RNA-processing protein 12.
   
 
 0.853
GMPS
GMP synthase (glutamine-hydrolysing).
   
    0.846
POLR1A
DNA-directed RNA polymerase I subunit RPA1.
   
    0.846
TNPO1
Transportin-1.
   
 
 0.842
ENSPCIP00000018195
E3 SUMO-protein ligase RanBP2-like.
   
 
 0.835
NAT10
RNA cytidine acetyltransferase isoform X1.
   
  
 0.835
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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