STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R16BProtein phosphatase 1 regulatory inhibitor subunit 16B. (612 aa)    
Predicted Functional Partners:
PPP1CB
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
   
 0.771
PPP1CC
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
   
 0.696
ENSPCIP00000042235
annotation not available
   
 0.696
ENSPCIP00000042505
annotation not available
   
 0.696
PPP1CA
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit.
   
 0.696
DHX35
Probable ATP-dependent RNA helicase DHX35.
   
 0.629
RNF24
Ring finger protein 24.
      
 0.553
GPT2
Alanine aminotransferase 2.
 
 
   0.541
TLCD3A
Protein FAM57A isoform X1.
    
 
 0.534
ENSPCIP00000042531
LOW QUALITY PROTEIN: alanine aminotransferase 1-like.
 
 
   0.529
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.