STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM83DProtein FAM83D. (590 aa)    
Predicted Functional Partners:
HMMR
Hyaluronan mediated motility receptor.
   
 
 0.941
CSNK1A1
Casein kinase I isoform X1.
    
 
 0.834
APBB3
Amyloid beta A4 precursor protein-binding family B member 3-like isoform X1.
   
 
 0.786
BACH1
Transcription regulator protein BACH1 isoform X1.
    
   0.783
AREG
LOW QUALITY PROTEIN: amphiregulin.
     
  0.747
AAMP
Angio-associated migratory cell protein isoform X1.
     
  0.714
EGF
Pro-epidermal growth factor isoform X1.
     
 0.657
EREG
Proepiregulin isoform X1.
     
  0.653
EPGN
Epigen isoform X1.
     
  0.652
ENSPCIP00000011642
annotation not available
    
 
 0.630
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.