STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX35Probable ATP-dependent RNA helicase DHX35. (703 aa)    
Predicted Functional Partners:
CDC40
Pre-mRNA-processing factor 17.
   
 0.918
SLU7
Pre-mRNA-processing factor SLU7.
   
 0.886
SYF2
Pre-mRNA-splicing factor SYF2.
    
 0.876
YJU2
Coiled-coil domain-containing protein 94.
   
 0.861
DDX49
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX49.
   
 0.859
UTP25
U3 small nucleolar RNA-associated protein 25.
   
 0.841
UTP3
UTP3 small subunit processome component.
   
 0.840
ITSN2
Intersectin-2.
   
  0.839
ENSPCIP00000016891
annotation not available
   
 0.836
CDC5L
Cell division cycle 5-like protein.
 
 
 0.826
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.