STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMSAP1LOW QUALITY PROTEIN: calmodulin-regulated spectrin-associated protein 1. (1609 aa)    
Predicted Functional Partners:
UBAC1
Ubiquitin-associated domain-containing protein 1.
 
    
 0.707
WDR47
WD repeat-containing protein 47 isoform X1.
 
 
 
 0.524
UNC119
Protein unc-119 homolog A isoform X1.
      
 0.495
KATNB1
Katanin p80 WD40 repeat-containing subunit B1 isoform X1.
    
 
 0.468
CUL2
Cullin 2.
      
 0.465
VPREB3
V-set pre-B cell surrogate light chain 3.
      
 0.461
APPL1
DCC-interacting protein 13 alpha.
   
 
 0.436
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
   
 
 0.436
PLEC
LOW QUALITY PROTEIN: plectin.
    
 
 0.423
DSP
Desmoplakin isoform X1.
    
 
 0.423
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.