Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDHDProbable D-lactate dehydrogenase, mitochondrial. (484 aa)    
Predicted Functional Partners:
HAGH
Hydroxyacylglutathione hydrolase, mitochondrial isoform X1.
    
 0.947
PKLR
Pyruvate kinase PKLR isoform X1.
   
 0.934
PKM
Pyruvate kinase PKM isoform X1.
   
 0.929
PDHA1
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform X1.
  
 0.921
LDHA
L-lactate dehydrogenase A chain isoform X1.
   
 0.919
LDHC
L-lactate dehydrogenase A chain-like isoform X1.
   
 0.919
ENSPCIP00000018473
Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like.
  
 0.919
LDHB
L-lactate dehydrogenase B chain.
   
 0.919
ENSPCIP00000033137
annotation not available
   
 0.919
PC
Pyruvate carboxylase, mitochondrial.
   
 
 0.916
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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