STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF31E3 ubiquitin-protein ligase RNF31. (1176 aa)    
Predicted Functional Partners:
RBCK1
RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1.
   
 0.999
SHARPIN
SHANK associated RH domain interactor.
    
 0.996
OTULIN
Ubiquitin thioesterase otulin isoform X1.
    
 0.983
RIPK1
Receptor-interacting serine/threonine-protein kinase 1 isoform X1.
    
 0.980
TNFRSF1A
Tumor necrosis factor receptor superfamily member 1A.
    
 0.979
ENSPCIP00000000677
Baculoviral IAP repeat-containing protein 2-like isoform X1.
    
 0.965
ENSPCIP00000000721
Baculoviral IAP repeat-containing protein 2-like isoform X1.
    
 0.965
XIAP
E3 ubiquitin-protein ligase XIAP.
    
 0.965
TBK1
Serine/threonine-protein kinase TBK1.
    
 0.962
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.
    
 0.961
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.