Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPHOSPH6M-phase phosphoprotein 6, animal type. (160 aa)    
Predicted Functional Partners:
EXOSC10
Exosome complex exonuclease RRP6.
   
 0.996
EXOSC3
Exosome complex component RRP40.
   
 0.993
EXOSC8
Exosome complex component RRP43.
   
 0.993
EXOSC1
Exosome complex component CSL4 isoform X1.
   
 0.991
EXOSC2
Exosome complex component RRP4 isoform X1.
   
 0.989
EXOSC7
Exosome component 7.
    
 0.989
MTREX
Superkiller viralicidic activity 2-like 2.
    
 0.988
C1D
Nuclear nucleic acid-binding protein C1D.
   
 0.985
ENSPCIP00000008232
annotation not available
   
 0.978
DIS3L
DIS3-like exonuclease 1 isoform X1.
   
 0.971
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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