Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSME2Proteasome activator subunit 2 (PA28 beta). (239 aa)    
Predicted Functional Partners:
PSME1
Proteasome activator subunit 1 (PA28 alpha).
  
0.999
PSMB9
Proteasome subunit beta type-9-like isoform X1.
   
 0.988
PSMB4
Proteasome subunit beta type-4.
   
 0.981
PSMA5
Proteasome subunit alpha type-5.
   
 0.973
PSMA2
Proteasome subunit alpha type-2.
   
 0.971
PSMB5
LOW QUALITY PROTEIN: proteasome subunit beta type-5.
   
 0.971
PSMA1
Proteasome subunit alpha type-1.
   
 0.970
PSMB1
Proteasome subunit beta type-1.
   
 0.970
ENSPCIP00000013578
annotation not available
   
 0.961
PSMA4
Proteasome subunit alpha type-4.
   
 0.953
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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