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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFDP1Craniofacial development protein 1. (310 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 
 0.962
RUVBL2
RuvB-like protein 2.
    
 
 0.920
VPS72
Vacuolar protein sorting-associated protein 72 homolog.
   
 
 0.887
ZNHIT1
Zinc finger HIT domain-containing protein 1 isoform X1.
    
 
 0.875
ENSPCIP00000011380
annotation not available
   
 
 0.864
RUVBL1
RuvB-like protein 1 (pontin 52).
   
 
 0.864
EP400
E1A binding protein p400.
    
 
 0.858
SRCAP
Helicase SRCAP isoform X1.
    
 
 0.858
YEATS4
YEATS domain-containing protein 4 isoform X1.
   
 
 0.847
TMEM170A
Transmembrane protein 170A isoform X1.
 
    
 0.741
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.