STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM170ATransmembrane protein 170A isoform X1. (144 aa)    
Predicted Functional Partners:
BCAR1
LOW QUALITY PROTEIN: breast cancer anti-estrogen resistance protein 1.
      
 0.747
CFDP1
Craniofacial development protein 1.
 
    
 0.680
MCPH1
Microcephalin isoform X1.
      
 0.581
LRIG2
Leucine-rich repeats and immunoglobulin-like domains protein 2.
      
 0.517
KIAA1109
LOW QUALITY PROTEIN: uncharacterized protein KIAA1109 homolog.
    
   0.504
OSBPL3
Oxysterol-binding protein-related protein 3 isoform X1.
      
 0.501
NDC1
Nucleoporin NDC1 isoform X1.
      
 0.493
NEDD9
Enhancer of filamentation 1 isoform X1.
      
 0.488
NUP205
Nuclear pore complex protein Nup205 isoform X1.
      
 0.477
NUP93
Nuclear pore complex protein Nup93 isoform X1.
      
 0.448
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.