Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FITM1Fat storage-inducing transmembrane protein 1. (295 aa)    
Predicted Functional Partners:
CILP2
Cartilage intermediate layer protein 2.
      
 0.761
ERLIN2
Erlin-2 isoform X1.
      
 0.755
HPGD
15-hydroxyprostaglandin dehydrogenase [NAD(+)] isoform X1.
      
 0.753
LRRC39
Leucine rich repeat containing 39.
   
  
 0.656
CENPT
Centromere protein T isoform X1.
   
  
 0.636
ITGB1BP2
Integrin beta-1-binding protein 2 isoform X1.
   
  
 0.600
LRRC2
Leucine rich repeat containing 2.
   
  
 0.493
HIF1AN
LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha inhibitor.
      
 0.479
WASF2
Wiskott-Aldrich syndrome protein family member 2 isoform X1.
      
 0.474
TMOD4
Tropomodulin-4.
   
  
 0.449
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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