STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF11DDB1- and CUL4-associated factor 11 isoform X1. (537 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1.
    
 0.991
COPS3
COP9 signalosome complex subunit 3 isoform X1.
    
  0.959
COPS6
COP9 signalosome complex subunit 6.
    
 0.955
CUL4B
Cullin-4B.
    
 0.950
CUL4A
Cullin 4A.
    
 0.950
DCAF7
DDB1- and CUL4-associated factor 7.
    
 0.939
DCAF5
DDB1- and CUL4-associated factor 5.
    
 0.936
COPS2
COP9 signalosome complex subunit 2 isoform X1.
    
 0.935
GPS1
COP9 signalosome complex subunit 1 isoform X1.
    
 0.930
COPS4
COP9 signalosome complex subunit 4 isoform X1.
    
 0.918
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.