STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000013706Lysyl-tRNA synthetase, class II. (574 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 0.999
MARS1
LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic.
  
 0.998
VARS1
LOW QUALITY PROTEIN: valine--tRNA ligase.
   
 0.949
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 0.938
AIMP2
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 isoform X1.
   
 0.938
IARS1
Isoleucine--tRNA ligase, cytoplasmic.
  
 0.918
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
  
 
 0.905
RARS1
LOW QUALITY PROTEIN: arginine--tRNA ligase, cytoplasmic.
  
 0.904
QARS1
LOW QUALITY PROTEIN: glutamine--tRNA ligase.
  
 0.903
ENSPCIP00000053608
Lysyl-tRNA synthetase, class II.
  
  
 
0.900
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.