STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOHLH1Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1. (382 aa)    
Predicted Functional Partners:
UBAC1
Ubiquitin-associated domain-containing protein 1.
      
 0.621
DPP7
Dipeptidyl-peptidase II.
      
 0.621
ZSCAN20
Zinc finger and SCAN domain-containing protein 20 isoform X1.
      
 0.621
DAB2IP
Disabled homolog 2-interacting protein isoform X1.
      
 0.621
ZBTB16
Zinc finger and BTB domain-containing protein 16 isoform X1.
      
 0.563
YBX2
LOW QUALITY PROTEIN: Y-box-binding protein 2.
      
 0.561
BCL6B
BCL6B transcription repressor.
      
 0.553
STRA8
LOW QUALITY PROTEIN: stimulated by retinoic acid gene 8 protein homolog.
      
 0.544
SOHLH2
Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 isoform X1.
      
0.503
SALL4
Sal-like protein 4 isoform X1.
      
 0.501
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.