Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NGLY1Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase isoform X1. (650 aa)    
Predicted Functional Partners:
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
    
 0.960
RAD23B
UV excision repair protein RAD23 homolog B isoform X1.
    
 0.959
ENSPCIP00000015824
annotation not available
    
 0.959
PSMC1
26S proteasome regulatory subunit T2.
   
 0.958
AMFR
E3 ubiquitin-protein ligase AMFR isoform X1.
   
 0.954
RAD23A
UV excision repair protein RAD23 homolog A isoform X1.
    
 0.953
DERL1
Derlin-1.
    
 0.941
UBXN1
UBX domain-containing protein 1/4.
    
 0.924
UBXN2B
UBX domain-containing protein 2B isoform X1.
    
 
 0.865
SYVN1
Synoviolin 1.
   
 0.834
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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