STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REC114Meiotic recombination protein REC114. (258 aa)    
Predicted Functional Partners:
TTF2
Transcription termination factor 2.
  
 
 0.950
XRCC1
X-ray repair cross complementing 1.
   
 0.909
MEI1
Meiosis inhibitor protein 1 isoform X1.
      
 0.864
LIG3
DNA ligase 3 isoform X1.
   
 0.806
FCSK
LOW QUALITY PROTEIN: L-fucose kinase.
  
  
 0.777
SPO11
Meiotic recombination protein SPO11 isoform X1.
   
  
 0.760
LIG4
DNA ligase 4.
   
 0.725
MEI4
Meiosis-specific protein MEI4.
    
 
 0.720
POLB
DNA polymerase beta isoform X1.
    
 0.691
POLL
DNA polymerase lambda isoform X1.
    
 0.691
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.