STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VITVitrin. (417 aa)    
Predicted Functional Partners:
ENSPCIP00000052719
annotation not available
 
     0.916
ENSPCIP00000002547
annotation not available
   
 0.660
ENSPCIP00000005738
annotation not available
   
 0.660
ENSPCIP00000008252
annotation not available
   
 0.660
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.660
ENSPCIP00000014246
annotation not available
   
 0.660
ENSPCIP00000039865
annotation not available
   
 0.660
COL6A5
LOW QUALITY PROTEIN: collagen alpha-5(VI) chain.
 
  
 0.607
GLE1
Nucleoporin GLE1.
   
 0.497
ENSPCIP00000018193
RanBP2-like and GRIP domain-containing protein 3.
   
 
 0.446
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.