Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VITVitrin. (417 aa)    
Predicted Functional Partners:
ENSPCIP00000052719
annotation not available
 
     0.915
COCH
Cochlin isoform X1.
    
   0.694
COL6A5
LOW QUALITY PROTEIN: collagen alpha-5(VI) chain.
 
  
 0.608
ENSPCIP00000002547
annotation not available
   
 0.470
ENSPCIP00000005738
annotation not available
   
 0.470
ENSPCIP00000008252
annotation not available
   
 0.470
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.470
ENSPCIP00000014246
annotation not available
   
 0.470
ENSPCIP00000039865
annotation not available
   
 0.470
SLC26A5
Solute carrier family 26, member 5.
   
  
 0.466
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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