STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRNP35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (263 aa)    
Predicted Functional Partners:
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.974
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 0.969
SNRPC
U1 small nuclear ribonucleoprotein C isoform X1.
   
 0.964
RBM25
RNA-binding protein 25 isoform X1.
   
 
0.941
SNRNP48
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
   
 0.929
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 
 0.927
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.924
LSM10
U7 snRNA-associated Sm-like protein LSm10 isoform X1.
   
 0.922
ZMAT5
U11/U12 small nuclear ribonucleoprotein 20 kDa protein.
   
 0.917
PDCD7
Programmed cell death protein 7.
    
 0.911
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.