STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH11G patch domain-containing protein 11 isoform X1. (262 aa)    
Predicted Functional Partners:
ENSPCIP00000013648
annotation not available
    
 
 0.576
RBM17
Splicing factor 45 isoform X1.
    
 
 0.576
NRDC
Nardilysin isoform X1.
    
 
 0.561
SF3B4
Splicing factor 3B subunit 4.
   
 0.558
SF3A2
Splicing factor 3A subunit 2.
   
 
 0.502
ZRSR2
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.
   
 0.479
ENSPCIP00000002547
annotation not available
   
 0.479
ENSPCIP00000005738
annotation not available
   
 0.479
ENSPCIP00000008252
annotation not available
   
 0.479
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.479
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.