Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UTRNLOW QUALITY PROTEIN: utrophin. (1065 aa)    
Predicted Functional Partners:
ENSPCIP00000045685
LOW QUALITY PROTEIN: dystrophin-like.
 
    
 0.924
ENSPCIP00000043148
annotation not available
 
      0.900
DAG1
Dystroglycan isoform X1.
    
 0.886
SNTA1
Alpha-1-syntrophin isoform X1.
   
 0.876
SGCD
Delta-sarcoglycan.
    
 0.856
SNTB2
Beta-2-syntrophin.
   
 0.847
SNTB1
Beta-1-syntrophin.
   
 0.835
SGCG
Gamma-sarcoglycan isoform X1.
    
 0.734
SSPN
Sarcospan.
    
 0.728
CTNNAL1
Alpha-catulin.
   
 
 0.720
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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