Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL2139S ribosomal protein L21, mitochondrial isoform X1. (430 aa)    
Predicted Functional Partners:
MRPL20
39S ribosomal protein L20, mitochondrial.
  
 0.988
MRPL19
39S ribosomal protein L19, mitochondrial.
  
 0.987
MRPL17
39S ribosomal protein L17, mitochondrial.
  
 0.985
MRPL27
39S ribosomal protein L27, mitochondrial.
  
 
 0.984
MRPL3
39S ribosomal protein L3, mitochondrial.
   
 0.982
MRPL12
39S ribosomal protein L12, mitochondrial.
   
 0.979
MRPS16
28S ribosomal protein S16, mitochondrial isoform X1.
  
 
 0.978
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
  
 
 0.978
ENSPCIP00000007609
annotation not available
  
 
 0.976
MRPL2
39S ribosomal protein L2, mitochondrial isoform X1.
   
 0.976
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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