MRGPRD protein (Phascolarctos cinereus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MRGPRD

Mas-related G protein-coupled receptor member D. (321 aa)

Predicted Functional Partners:

NPFF

0.568

GNG4

0.522

GPR139

0.515

TRPA1

0.477

CYSLTR2

0.477

GNAI1

0.450

GNAI3

0.450

GNAI2

0.450

LPAR5

0.413

TRPM8

0.408

Your Current Organism:

Phascolarctos cinereus

NCBI taxonomy Id: 38626
Other names: P. cinereus, koala

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYSLTR2	MRGPRD	ENSPCIP00000054287	ENSPCIP00000014181	LOW QUALITY PROTEIN: cysteinyl leukotriene receptor 2.	Mas-related G protein-coupled receptor member D.	0.477
GNAI1	GNAI2	ENSPCIP00000004463	ENSPCIP00000044188	Guanine nucleotide-binding protein G(i) subunit alpha-1.	Guanine nucleotide-binding protein G(i) subunit alpha-2.	0.900
GNAI1	GNAI3	ENSPCIP00000004463	ENSPCIP00000033568	Guanine nucleotide-binding protein G(i) subunit alpha-1.	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	0.900
GNAI1	GNG4	ENSPCIP00000004463	ENSPCIP00000024179	Guanine nucleotide-binding protein G(i) subunit alpha-1.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	0.903
GNAI1	GPR139	ENSPCIP00000004463	ENSPCIP00000048150	Guanine nucleotide-binding protein G(i) subunit alpha-1.	Probable G-protein coupled receptor 139.	0.450
GNAI1	MRGPRD	ENSPCIP00000004463	ENSPCIP00000014181	Guanine nucleotide-binding protein G(i) subunit alpha-1.	Mas-related G protein-coupled receptor member D.	0.450
GNAI2	GNAI1	ENSPCIP00000044188	ENSPCIP00000004463	Guanine nucleotide-binding protein G(i) subunit alpha-2.	Guanine nucleotide-binding protein G(i) subunit alpha-1.	0.900
GNAI2	GNAI3	ENSPCIP00000044188	ENSPCIP00000033568	Guanine nucleotide-binding protein G(i) subunit alpha-2.	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	0.900
GNAI2	GNG4	ENSPCIP00000044188	ENSPCIP00000024179	Guanine nucleotide-binding protein G(i) subunit alpha-2.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	0.903
GNAI2	GPR139	ENSPCIP00000044188	ENSPCIP00000048150	Guanine nucleotide-binding protein G(i) subunit alpha-2.	Probable G-protein coupled receptor 139.	0.450
GNAI2	MRGPRD	ENSPCIP00000044188	ENSPCIP00000014181	Guanine nucleotide-binding protein G(i) subunit alpha-2.	Mas-related G protein-coupled receptor member D.	0.450
GNAI3	GNAI1	ENSPCIP00000033568	ENSPCIP00000004463	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	Guanine nucleotide-binding protein G(i) subunit alpha-1.	0.900
GNAI3	GNAI2	ENSPCIP00000033568	ENSPCIP00000044188	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	Guanine nucleotide-binding protein G(i) subunit alpha-2.	0.900
GNAI3	GNG4	ENSPCIP00000033568	ENSPCIP00000024179	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	0.903
GNAI3	GPR139	ENSPCIP00000033568	ENSPCIP00000048150	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	Probable G-protein coupled receptor 139.	0.450
GNAI3	MRGPRD	ENSPCIP00000033568	ENSPCIP00000014181	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	Mas-related G protein-coupled receptor member D.	0.450
GNG4	GNAI1	ENSPCIP00000024179	ENSPCIP00000004463	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Guanine nucleotide-binding protein G(i) subunit alpha-1.	0.903
GNG4	GNAI2	ENSPCIP00000024179	ENSPCIP00000044188	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Guanine nucleotide-binding protein G(i) subunit alpha-2.	0.903
GNG4	GNAI3	ENSPCIP00000024179	ENSPCIP00000033568	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Guanine nucleotide-binding protein G(k) subunit alpha isoform X1.	0.903
GNG4	GPR139	ENSPCIP00000024179	ENSPCIP00000048150	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Probable G-protein coupled receptor 139.	0.495