STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHPRHE3 ubiquitin-protein ligase SHPRH isoform X1. (1696 aa)    
Predicted Functional Partners:
RAD18
E3 ubiquitin-protein ligase RAD18 isoform X1.
    
 0.895
ENSPCIP00000046034
annotation not available
    
 0.790
PCNA
Proliferating cell nuclear antigen.
  
 0.784
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 0.774
ENSPCIP00000046432
annotation not available
    
 0.747
ZNF609
Zinc finger protein 609 isoform X1.
   
  
 0.738
WRN
Werner syndrome ATP-dependent helicase.
  
 
 0.724
UBE2N
Ubiquitin-conjugating enzyme E2 N.
    
 0.707
ENSPCIP00000026293
Ubiquitin-conjugating enzyme E2 N-like isoform X1.
    
 0.707
ENSPCIP00000021063
annotation not available
    
 0.675
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.