STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR2E1Nuclear receptor subfamily 2 group E member 1. (385 aa)    
Predicted Functional Partners:
ATN1
Atrophin-1 (dentatorubral-pallidoluysian atrophy protein).
    
 0.797
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
    
 0.666
RERE
Arginine-glutamic acid dipeptide repeats protein isoform X1.
    
 0.653
HDAC6
Histone deacetylase 6 isoform X1.
   
 0.627
MED1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
    
  0.573
OTX2
Homeobox protein OTX2.
   
 
 0.535
AMELX
Amelogenin X-linked.
   
    0.529
RCVRN
Recoverin.
   
 
 0.503
NCOR2
Nuclear receptor corepressor 2.
    
 0.489
ENSPCIP00000006828
annotation not available
    
 0.484
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.