Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SKA2Spindle and kinetochore-associated protein 2. (211 aa)    
Predicted Functional Partners:
SKA1
Spindle and kinetochore-associated protein 1 isoform X1.
    
 0.997
SKA3
Spindle and kinetochore-associated protein 3 isoform X1.
   
 0.991
PLK1
Serine/threonine-protein kinase PLK1.
   
 
 0.950
BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
     
 0.942
SGO1
LOW QUALITY PROTEIN: shugoshin 1.
   
 
 0.920
NUDC
LOW QUALITY PROTEIN: nuclear migration protein nudC.
     
 0.894
NDC80
Kinetochore protein NDC80 homolog isoform X1.
   
 0.879
INCENP
Inner centromere protein isoform X1.
     
 0.875
KIF18A
Kinesin-like protein KIF18A isoform X1.
   
 
 0.873
RCC2
Protein RCC2.
     
  0.871
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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