Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CWC22Pre-mRNA-splicing factor CWC22 homolog. (833 aa)    
Predicted Functional Partners:
EIF4A3
Eukaryotic initiation factor 4A-III.
    
 0.923
FAM32A
Protein FAM32A.
    
  0.919
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
   
 0.918
SLU7
Pre-mRNA-processing factor SLU7.
   
 0.916
CDC40
Pre-mRNA-processing factor 17.
   
 0.899
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.884
CWC27
CWC27 spliceosome associated cyclophilin.
   
 0.883
YJU2
Coiled-coil domain-containing protein 94.
   
 0.879
SYF2
Pre-mRNA-splicing factor SYF2.
   
 0.873
CRNKL1
Crooked neck-like protein 1.
   
 0.871
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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