Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A4Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 4. (552 aa)    
Predicted Functional Partners:
SFMBT2
Scm-like with four MBT domains protein 2.
      
 0.855
SMOC1
SPARC related modular calcium binding 1.
      
 0.847
SLC1A5
Solute carrier family 1 (neutral amino acid transporter), member 5.
   
 
 0.760
SLC7A1
Solute carrier family 7 (cationic amino acid transporter), member 1.
   
 
 0.691
SLC1A7
Solute carrier family 1 (glutamate transporter), member 7.
    
 
 0.643
STEAP3
Metalloreductase STEAP3 isoform X1.
   
  
 0.642
JADE1
Protein Jade-1 isoform X1.
      
 0.640
SLC1A1
Solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1.
    
 
 0.629
SLC2A3
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 3.
   
  
 0.590
SCN11A
Sodium channel protein type 11 subunit alpha isoform X1.
      
 0.565
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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