Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC141LOW QUALITY PROTEIN: coiled-coil domain-containing protein 141. (1526 aa)    
Predicted Functional Partners:
ENSPCIP00000014417
annotation not available
 
 
  
0.730
PES1
Pescadillo homolog.
   
 0.628
ENSPCIP00000015354
annotation not available
    
 0.614
WDR18
Pre-rRNA-processing protein IPI3.
   
 0.608
CER1
Cerberus 1.
   
 
 0.593
TEX10
Testis-expressed protein 10 isoform X1.
   
 0.591
SLC35F1
Solute carrier family 35, member F1/2.
   
 
 0.591
ENSPCIP00000014482
annotation not available
 
 
  
0.588
TTN
LOW QUALITY PROTEIN: titin.
 
 
  
 0.558
FNDC4
Fibronectin type III domain-containing protein 4.
      
 0.513
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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