Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNPO2Synaptopodin-2 isoform X1. (1253 aa)    
Predicted Functional Partners:
OCIAD2
OCIA domain-containing protein 2 isoform X1.
      
 0.755
RNF150
RING finger protein 150 isoform X1.
   
  
 0.754
FLNA
Filamin-A isoform X1.
   
 
 0.607
MYOZ2
Myozenin-2 isoform X1.
 
 
  
 0.598
DHRS7C
Dehydrogenase/reductase SDR family member 7C.
   
  
 0.585
ENSPCIP00000011899
annotation not available
    
 
 0.580
ARFIP1
Arfaptin-1 isoform X1.
    
 
 0.580
SYNM
LOW QUALITY PROTEIN: synemin.
   
 
 0.547
PTPRA
Receptor-type tyrosine-protein phosphatase alpha isoform X1.
    
 0.540
ENSPCIP00000030976
annotation not available
   
  
 0.524
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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