Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000014428annotation not available (230 aa)    
Predicted Functional Partners:
ENSPCIP00000052217
Large subunit ribosomal protein LP1.
  
 0.945
RPL5
60S ribosomal protein L5 isoform X1.
  
 0.937
RPL4
Large subunit ribosomal protein L4e.
  
 0.934
RPL6
Large subunit ribosomal protein L6e.
   
 0.934
RPS20
LOW QUALITY PROTEIN: 40S ribosomal protein S20.
  
 
 0.916
ENSPCIP00000002547
annotation not available
   
 0.909
ENSPCIP00000005738
annotation not available
   
 0.909
ENSPCIP00000008252
annotation not available
   
 0.909
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.909
ENSPCIP00000014246
annotation not available
   
 0.909
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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