Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSMCE2LOW QUALITY PROTEIN: E3 SUMO-protein ligase NSE2. (215 aa)    
Predicted Functional Partners:
SMC5
LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5.
    
 0.998
NSMCE1
Non-structural maintenance of chromosomes element 1 homolog isoform X1.
    
 0.996
NSMCE4A
Non-structural maintenance of chromosomes element 4 homolog A.
    
 0.992
SMC6
Structural maintenance of chromosomes protein 6 isoform X1.
    
 0.988
ENSPCIP00000029895
annotation not available
    
 0.975
ENSPCIP00000009109
Non-structural maintenance of chromosomes element 3 homolog.
   
 0.950
ENSPCIP00000050711
Melanoma-associated antigen F1-like.
   
 0.950
UBE2I
SUMO-conjugating enzyme UBC9 isoform X1.
   
 0.938
KCTD2
LOW QUALITY PROTEIN: BTB/POZ domain-containing protein KCTD2.
   
 0.891
BLM
Bloom syndrome protein.
    
 
 0.854
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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