STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX3Peroxisomal biogenesis factor 3 isoform X1. (373 aa)    
Predicted Functional Partners:
PEX19
Peroxisomal biogenesis factor 19.
    
 0.999
PEX12
Peroxisome assembly protein 12.
   
 0.966
PEX13
Peroxisome biogenesis factor 13.
   
 0.963
PEX14
LOW QUALITY PROTEIN: peroxisomal membrane protein PEX14.
   
 0.924
PEX16
Peroxisomal biogenesis factor 16.
    
 0.916
CLDN15
Claudin-15 isoform X1.
     
 0.895
ABCD3
ATP-binding cassette sub-family D member 3 isoform X1.
   
 0.888
PEX2
Peroxisome biogenesis factor 2.
   
 
 0.834
FAM185A
Family with sequence similarity 185 member A.
   
 0.829
PEX11B
Peroxisomal membrane protein 11B isoform X1.
   
 0.828
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.