Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX3Peroxisomal biogenesis factor 3 isoform X1. (373 aa)    
Predicted Functional Partners:
PEX19
Peroxisomal biogenesis factor 19.
   
 0.997
PEX12
Peroxisome assembly protein 12.
   
 0.987
PEX13
Peroxisome biogenesis factor 13.
   
 0.982
PEX16
Peroxisomal biogenesis factor 16.
   
 0.981
PEX14
LOW QUALITY PROTEIN: peroxisomal membrane protein PEX14.
   
 0.969
ABCD3
ATP-binding cassette sub-family D member 3 isoform X1.
   
 0.923
PEX11B
Peroxisomal membrane protein 11B isoform X1.
   
 0.880
PEX11A
Peroxisomal membrane protein 11A isoform X1.
   
 0.859
FAM185A
Family with sequence similarity 185 member A.
   
 0.846
PEX26
Peroxisome assembly protein 26 isoform X1.
    
 0.836
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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