Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FIBINFin bud initiation factor homolog. (211 aa)    
Predicted Functional Partners:
FMOD
Fibromodulin.
   
    0.993
GLRB
Glycine receptor subunit beta isoform X1.
      
 0.629
UCMA
Unique cartilage matrix-associated protein.
      
 0.615
PGBD5
PiggyBac transposable element-derived protein 5.
      
 0.581
USH1C
USH1 protein network component harmonin.
      
 0.579
GLT8D2
Glycosyltransferase 8 domain-containing protein 2.
   
  
 0.521
OPN1SW
Short wavelength-sensitive opsin.
      
 0.505
SUSD5
Sushi domain-containing protein 5.
      
 0.504
CPNE9
LOW QUALITY PROTEIN: copine-9.
      
 0.488
CPNE5
Copine-5 isoform X1.
      
 0.488
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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