STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAGL1Zinc finger protein PLAGL1 isoform X1. (472 aa)    
Predicted Functional Partners:
MEST
Mesoderm-specific transcript homolog protein isoform X1.
   
 
 0.543
SLITRK6
SLIT and NTRK-like protein 6 isoform X1.
    
 0.481
EIF2AK3
Eukaryotic translation initiation factor 2-alpha kinase 3.
    
 0.472
DLK1
Protein delta homolog 1.
    
 0.465
FBN1
Fibrillin 1.
    
 0.463
PHACTR2
Phosphatase and actin regulator 2 isoform X1.
      
 0.461
ENSPCIP00000029579
annotation not available
      
 0.461
CBS
Cystathionine beta-synthase isoform X1.
    
 
 0.450
RAG1
V(D)J recombination-activating protein 1.
   
 
 0.448
GRB10
Growth factor receptor-bound protein 10 isoform X1.
    
 0.443
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.