Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RCOR1REST corepressor 1. (504 aa)    
Predicted Functional Partners:
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
   
 0.998
REST
RE1-silencing transcription factor.
    
 0.997
PHF21A
LOW QUALITY PROTEIN: PHD finger protein 21A.
   
 0.994
HMG20B
High mobility group 20B.
   
 0.992
HDAC2
Histone deacetylase 1/2.
    
 0.981
HMG20A
High mobility group protein 20A.
   
 0.957
ZNF217
Zinc finger protein 217.
    
 0.949
STN1
CST complex subunit STN1 isoform X1.
    
   0.911
TRIP4
Activating signal cointegrator 1 isoform X1.
    
   0.911
HDAC1
Histone deacetylase 1/2.
    
 0.911
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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