Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EMSYBRCA2-interacting transcriptional repressor EMSY isoform X1. (1341 aa)    
Predicted Functional Partners:
GATAD1
GATA zinc finger domain containing 1.
    
 
 0.919
CBX1
Chromobox protein homolog 1.
    
 
 0.906
PHF12
PHD finger protein 12 isoform X1.
   
 
 0.905
KDM5A
LOW QUALITY PROTEIN: lysine-specific demethylase 5A.
   
 
 0.821
CBX5
Chromobox protein homolog 5 isoform X1.
    
 
 0.812
SIN3A
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
   
 
 0.802
SIN3B
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b.
   
 
 0.802
ENSPCIP00000012617
annotation not available
   
 
 0.777
MORF4L1
Mortality factor 4-like protein 1 isoform X1.
   
 
 0.777
CBX3
Chromobox protein homolog 3 isoform X1.
    
 
 0.749
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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