STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL8Kelch-like protein 8 isoform X1. (636 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.813
SQSTM1
Sequestosome-1 isoform X1.
    
 0.682
BBS1
LOW QUALITY PROTEIN: Bardet-Biedl syndrome 1 protein.
    
 0.637
BBS9
Bardet-Biedl syndrome 9 protein.
    
 0.622
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.618
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
    
 0.606
BBS7
Bardet-Biedl syndrome 7 protein isoform X1.
   
 0.588
TTC8
LOW QUALITY PROTEIN: tetratricopeptide repeat protein 8.
   
 0.570
BNIPL
Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein isoform X1.
      
 0.561
UGDH
UDP-glucose 6-dehydrogenase.
      
 0.553
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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