STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLHL8Kelch-like protein 8 isoform X1. (636 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.964
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X1.
   
   0.816
KLHL17
Kelch-like protein 17 (actinfilin).
    
  0.750
KLHL12
LOW QUALITY PROTEIN: kelch-like protein 12.
    
  0.676
APPBP2
Amyloid protein-binding protein 2.
    
 0.652
FBXO38
F-box only protein 38 isoform X1.
   
  
 0.637
SQSTM1
Sequestosome-1 isoform X1.
    
 0.632
BNIPL
Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein isoform X1.
      
 0.620
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.609
MED27
Mediator of RNA polymerase II transcription subunit 27.
    
 
 0.601
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.