STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCC1GRIP and coiled-coil domain-containing protein 1. (772 aa)    
Predicted Functional Partners:
BYSL
Essential nuclear protein 1.
   
 0.943
NOB1
RNA-binding protein NOB1 isoform X1.
   
 0.908
TSR1
Pre-rRNA-processing protein TSR1 homolog isoform X1.
   
 0.906
IMP4
U3 small nucleolar ribonucleoprotein protein IMP4.
   
 
 0.872
LTV1
Protein LTV1 homolog.
   
 0.869
TMF1
TATA element modulatory factor 1.
     
 0.867
RIOK2
Serine/threonine-protein kinase RIO2.
   
 0.867
PWP2
Periodic tryptophan protein 2 homolog.
   
 
 0.866
HEATR1
U3 small nucleolar RNA-associated protein 10.
   
 
 0.860
DIMT1
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase.
   
 
 0.849
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.