Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDH20Protocadherin delta 1. (970 aa)    
Predicted Functional Partners:
CENPA
LOW QUALITY PROTEIN: histone H3-like centromeric protein A.
      
 0.856
PCDH7
Protocadherin-7 isoform X1.
   
  0.828
ENSPCIP00000029992
annotation not available
   
 0.589
PCDH1
Protocadherin-1 isoform X1.
   
 0.588
CUTC
cutC copper transporter.
      
 0.553
FAM102B
Family with sequence similarity 102 member B.
      
 0.519
BRICD5
BRICHOS domain-containing protein 5.
      
 0.513
NBAS
LOW QUALITY PROTEIN: neuroblastoma-amplified sequence.
      
 0.509
ANKRD23
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 23.
    
 0.508
TMEM37
Voltage-dependent calcium channel gamma-like subunit.
      
 0.493
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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