Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain-containing protein 18 isoform X1. (1297 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain-containing protein 14 isoform X1.
   
 
 0.823
KIAA2026
Uncharacterized protein KIAA2026 homolog.
      
 0.629
PRPF19
Pre-mRNA-processing factor 19.
    
 
 0.619
CCDC13
Coiled-coil domain-containing protein 13.
    
 
 0.574
PARPBP
PCNA-interacting partner isoform X1.
   
  
 0.565
CEP135
Centrosomal protein of 135 kDa isoform X1.
   
   0.542
DMRT2
LOW QUALITY PROTEIN: doublesex- and mab-3-related transcription factor 2.
    
   0.529
SFXN4
Sideroflexin-4.
      
 0.524
ANKRD12
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 12.
    
 
 0.512
ENSPCIP00000035187
annotation not available
   
   0.506
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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